PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM02G22980.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 393aa    MW: 43630.8 Da    PI: 5.4359
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM02G22980.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM97.32.3e-30572001128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra....... 77 
                      lp+G++F+P+d el+ e+L++k+          +  +e+i+++d    i++++P++Lp  +k++ ++ +fF++ +++y  g+rk+r+       
  OGLUM02G22980.1  57 LPAGVKFDPSDLELL-EHLEQKIGLGGskphtfI--DEFIPTIDndegICYSHPENLP-GMKKDGTSGHFFHRVSNAYGCGQRKRRKisncdhv 146
                      799************.99****876654555332..233444433445**********.677888999******************87899998 PP

              NAM  78 ..tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                        +++ +W++tgk+k++++ kg ++g kk++v+y  ++r  k+ k++Wvmh+y+l
  OGLUM02G22980.1 147 vsVEHVRWHKTGKSKAIVE-KGVTKGWKKIMVLYksSQRGAKPDKANWVMHQYHL 200
                      887899*************.999***********4435777888*********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.96E-3542219IPR003441NAC domain
PROSITE profilePS5100528.86957219IPR003441NAC domain
PfamPF023654.1E-1358200IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 393 aa     Download sequence    Send to blast
MARSWLITGR GVAKKIRNAP HCSSRPISEL GAEAQMECPN CKHVIDNSDV AIQWPGLPAG  60
VKFDPSDLEL LEHLEQKIGL GGSKPHTFID EFIPTIDNDE GICYSHPENL PGMKKDGTSG  120
HFFHRVSNAY GCGQRKRRKI SNCDHVVSVE HVRWHKTGKS KAIVEKGVTK GWKKIMVLYK  180
SSQRGAKPDK ANWVMHQYHL GAEEDEKDGE LVVSKISYQL HGKQIDKSET GNADEESDVF  240
AARVGPKTPK TNTPQPCRLK NSPCETENYD PILEDQDEEE SNIPIVSLKD DAGNPAWCAG  300
ETQAAREAVQ ACPNLDESLR CHEVLDSFYH ETLLPSDRPI LSQGGNEILD RNLNAVYGLP  360
DLYNVDLGTP PDFQLADLQF GSQESIGNWL DSI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1219530.0AK121953.1 Oryza sativa Japonica Group cDNA clone:J033107L05, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015624086.10.0PREDICTED: NAC domain-containing protein 73
SwissprotQ6NQK25e-82NAC8_ARATH; NAC domain-containing protein 8
TrEMBLA0A0D9YUE90.0A0A0D9YUE9_9ORYZ; Uncharacterized protein
STRINGLOC_Os02g38130.10.0(Oryza sativa Japonica Group)
STRINGORGLA02G0193300.10.0(Oryza glaberrima)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21103799
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01600.15e-90NAC domain containing protein 44